U
    mdP@                     @   s\  d dl Z d dlZd dlZd dlZd dlZd dlmZ d dl	m
Z
 d dlmZ d dlmZmZ d dlmZ d dlmZmZ d dlmZmZ dd	 Zed Zd
ZdZdZeeefZeeefZe dZ!e dZ"eeeg\Z#Z$edk  ej%Z&edk  ej%Z'ee&e'g\Z(Z)eeefZ*e+e*e*j,Z-di fdi fde.ddfdi fde.eefdfde.e-fdfdi fdi fdi fg	Z/eedkre/0de.deefdf ne/0d e.deefdf ej12d!ej1j3d"e/d#d$ d%ej13d&eefe!e"fe#e$fgd'd( Z4ej13d)eej13d*e&e'fe(e)fgd+d, Z5ej12d!ej1j3d"e/d-d$ d%ej13d.ee!e#gd/d0 Z6ej12d!ej1j3d"e/d1d$ d%d2d3 Z7ej13d)eej13d4e&e(gd5d6 Z8ej12d!ej13d7d8d9gej1j3d"e/d:d$ d%ej13d.ee!gd;d< Z9ej12d!ej13d)eej13d4e&e(gd=d> Z:ej13d&eefe!e"fe#e$fgd?d@ Z;dAdB Z<dCdD Z=ej12d!dEdF Z>ej13dGe?dHdIdJge@dKfe?dHdIejAge@dLfeBdHdIdHgeCdMfe?dNdOdPge@dQfe?g e@dRfgdSdT ZDdUdV ZEdWdX ZFej12d!ej13dYdHdIdZgd[d\ ZGdS )]    N)cdist)DistanceMetric)BOOL_METRICSDistanceMetric32)check_random_state)assert_allclosecreate_memmap_backed_data)
sp_versionparse_versionc                 C   s   t | | | d|  S )Ng      ?)npsum)x1x2p r   `/home/sam/Atlas/atlas_env/lib/python3.8/site-packages/sklearn/metrics/tests/test_dist_metrics.py	dist_func   s    r            float32g333333?gffffff?	euclideanZ	cityblock	minkowski)         ?      )r   Z	chebyshev
seuclideanVmahalanobisVIZhammingZcanberraZ
braycurtisz
1.8.0.dev0)r   r   r   r   w
wminkowskiz/ignore:WMinkowskiDistance:FutureWarning:sklearnmetric_param_gridc                 C   s   | d S Nr   r   paramsr   r   r   <lambda>M       r*   )ZidszX, Yc              
   C   s  |j |j   krtjkr"n ntnt}| \}}| }t|t| }}tj	|
  D ]4}	tt||	}
i }|dkr|j tjkrddi}|dkrd }ttdkrt}t| t|||f|
}W 5 Q R X nt|||f|
}|j|f|
}|||}|jjs
tt||f| |||}|jjs2tt||f| |||}|jjsZtt||f| |||}|jjstt||f| qZd S )Nr    rtolư>r%   1.6.0)dtyper   float64r   r   keyssp
csr_matrix	itertoolsproductvaluesdictzipr   r	   r
   DeprecationWarningpytestwarnsr   
get_metricpairwiseflagsc_contiguousAssertionErrorr   )r&   XYDistanceMetricInterfacemetric
param_gridr1   X_csrY_csrvalskwargs	rtol_dictZWarningToExpectD_scipy_cdistdm	D_sklearnr   r   r   
test_cdistK   s<    $rN   rD   zX_bool, Y_boolc                 C   s   t ||| }t| }|||}t|| t|t| }}|||}|jjsZt	t|| |||}|jjs|t	t|| |||}|jjst	t|| |||}|jjst	t|| d S N)
r   r   r<   r=   r   r2   r3   r>   r?   r@   )rD   X_boolY_boolrK   rL   rM   
X_bool_csrZ
Y_bool_csrr   r   r   test_cdist_bool_metric   s"    




rS   c                 C   s   | d S r'   r   r(   r   r   r   r*      r+   rA   c              
   C   s`  |j tjkrtnt}| \}}| }t|}tj	|
  D ]}tt||}i }	|dkrp|j tjkrpddi}	|dkrttdkrtd d }
ttdkrt}
t|
 t|||f|}W 5 Q R X nt|||f|}|j|f|}||}|jjstt||f|	 ||}|jjs$tt||f|	 |||}|jjsLtt||f|	 q<d S )Nr    r,   r-   r%   z1.8.0z)wminkowski will be removed in SciPy 1.8.0r.   )r/   r   r0   r   r   r1   r2   r3   r4   r5   r6   r7   r8   r   r	   r
   r:   skipr9   r;   r   r<   r=   r>   r?   r@   r   )r&   rA   rC   rD   rE   r1   rF   rH   rI   rJ   ZExceptionToAssertD_scipy_pdistrL   rM   ZD_sklearn_csrr   r   r   
test_pdist   s:    



rV   c                 C   s   | d S r'   r   r(   r   r   r   r*      r+   c                 C   s   | \}}|  }d}tj|  D ]}tt||}tj|f|}tj|f|}|	t
}	|	t}
|	j|
j  kr~tjksn tt|	|
|d |	t
t}	|	tt}
t|	|
|d q"d S )Ngh㈵>r,   )r1   r4   r5   r6   r7   r8   r   r<   r   r=   X64X32r/   r   r0   r@   r   Y64Y32)r&   rD   rE   r1   r,   rH   rI   Zdm64Zdm32ZD64ZD32r   r   r   'test_distance_metrics_dtype_consistency   s    

 r\   rP   c                 C   sL   t ||| }t| }||}t|| t|}||}t|| d S rO   )r   r   r<   r=   r   r2   r3   )rD   rP   rU   rL   rM   rR   r   r   r   test_pdist_bool_metrics   s    




r]   writable_kwargsTFc                 C   s   | d S r'   r   r(   r   r   r   r*     r+   c                 C   s   |j tjkrtnt}|\}}| }tj|  D ]}t	dd |D rtt
|}|D ]}t|tjrV|j| d qVtt||}	|j|f|	}
|
|}tt|
}||}t|| q2d S )Nc                 s   s   | ]}t |tjV  qd S rO   )
isinstancer   ndarray).0valr   r   r   	<genexpr>  s     ztest_pickle.<locals>.<genexpr>write)r/   r   r0   r   r   r1   r4   r5   r6   anycopydeepcopyr_   r`   setflagsr7   r8   r<   r=   pickleloadsdumpsr   )r^   r&   rA   rC   rD   rE   r1   rH   rb   rI   rL   D1dm2D2r   r   r   test_pickle	  s     


rp   c                 C   s<   t | }||}tt|}||}t|| d S rO   )r   r<   r=   rj   rk   rl   r   )rD   rP   rL   rm   rn   ro   r   r   r   test_pickle_bool_metrics$  s
    


rq   c                 C   sh  | j tjkrtnt}t| d d d df } t|d d d df }t| t| }}dd }t|j	d |j	d f}t
| D ],\}}t
|D ]\}	}
|||
|||	f< qq|d}|| |}t||td| d dd t|| |||}|jjstt|| |||}|jjs6tt|| || |}|jjsZtt|| d S )	Nr   c                 S   sh   dt t t d| d |d   d t | d t |d  t d| d |d   d    S )Nr         ?r   r   )r   Zarcsinsqrtsincos)r   r   r   r   r   haversine_slow=  s    8z-test_haversine_metric.<locals>.haversine_slowr   	haversinerr   r-   rW   )r/   r   r0   r   r   Zasarrayr2   r3   Zzerosshape	enumerater<   r=   r   Zdist_to_rdistrt   r>   r?   r@   )rA   rB   rC   rF   rG   rv   ZD_referenceixijZyjrw   rM   r   r   r   test_haversine_metric/  s6    
  


r}   c            	      C   s   t jd} td}tjdtdd}tt|}tt|}|| }|| }|| }|| }t	|| t	|| d S )N)
   r   r   pyfuncr   )funcr   )
r   randomr   r<   r   rj   rk   rl   r=   r   )	rA   r   r   Zeuclidean_pklZ
pyfunc_pklrm   ro   ZD1_pklZD2_pklr   r   r   test_pyfunc_metric`  s    





r   c                  C   sR   dd } t d}|dd}tjd| d}td}t||||d	  d S )
Nc                 S   s$   | j d dkstt| | d S )Nr   r   r   )rx   r@   r   r   )xyr   r   r   custom_metricx  s    z+test_input_data_size.<locals>.custom_metricr   r~   r   r   )r   r   r   )r   randr   r<   r   r=   )r   rngrA   r   Zeuclr   r   r   test_input_data_sizeu  s    
r   c                  C   sf   t d} | d}| dd}|jdd |jdd tjd|d tjdd	|d
 tjd|d d S )Nr   d   r~   Frd   r   r   r%   r   r#   r    r!   )r   r   ri   r   r<   )r   weightsr"   r   r   r   test_readonly_kwargs  s    
r   zw, err_type, err_msgr   r   iz!w cannot contain negative weightszw contains NaNz6A sparse matrix was passed, but dense data is requiredabcz!could not convert string to floatza minimum of 1 is requiredc              	   C   s.   t j||d tjdd| d W 5 Q R X d S )Nmatchr   r   r#   )r:   raisesr   r<   )r$   Zerr_typeerr_msgr   r   r   -test_minkowski_metric_validate_weights_values  s    r   c               	   C   sf   t td } tjdd| d}dtjd  d| jd  d}tjt	|d	 |
tt W 5 Q R X d S )
Nr   r   r   r#   zEMinkowskiDistance: the size of w must match the number of features \(z\). Currently len\(w\)=r   .r   )r   random_sampledr   r<   rX   rx   r:   r   
ValueErrorr=   rZ   )Zw2rL   msgr   r   r   +test_minkowski_metric_validate_weights_size  s    r   c               	   C   s<   t t} d}tjt|d tjdd| d W 5 Q R X d S )Nz/WMinkowskiDistance is deprecated in version 1.1r   r%   r   r#   )r   r   r   r:   r;   FutureWarningr   r<   )r$   r   r   r   r   test_wminkowski_deprecated  s    
r   r   r   c                 C   sX   t t}tjd| |d|   d}tjd| |d}|tt}|tt}t|| d S )Nr%   r   r#   r   )	r   r   r   r   r<   r=   rX   rZ   r   )r   r$   Zdm_wmksZdm_mksZD_wmksZD_mksr   r   r   %test_wminkowski_minkowski_equivalence  s    
r   )Hr4   rj   rg   numpyr   r:   Zscipy.sparsesparser2   Zscipy.spatial.distancer   Zsklearn.metricsr   Zsklearn.metrics._dist_metricsr   r   Zsklearn.utilsr   Zsklearn.utils._testingr   r   Zsklearn.utils.fixesr	   r
   r   r   r   Zn1Zn2r   rX   rZ   ZastyperY   r[   ZX_mmapZY_mmapr0   rP   rQ   ZX_bool_mmapZY_bool_mmapr   dotTr"   r7   ZMETRICS_DEFAULT_PARAMSappendmarkfilterwarningsZparametrizerN   rS   rV   r\   r]   rp   rq   r}   r   r   r   arrayr   nanr3   	TypeErrorr   r   r   r   r   r   r   r   <module>   s   


  1 
  .
  "
  

0



